PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.8H1P2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 170aa    MW: 18675.3 Da    PI: 8.3155
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.8H1P2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH162.1e-0557961054
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 + R +++ +++  L++l+ +      +K + +++Le+A++YI  L
  Araip.8H1P2 57 KERKEKLSERIVALQQLVSPY-----GKTDTSSVLEEAMQYIGFL 96
                 78999**************99.....9***************887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.01E-743101No hitNo description
SuperFamilySSF474591.57E-1146109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.6044796IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-852106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.6E-453102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009739Biological Processresponse to gibberellin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MIASSFCNAD SMFPREEGVD VRKMMGHKRS PCSVDQSSYT SIESKRQKAN DLSITAKERK  60
EKLSERIVAL QQLVSPYGKT DTSSVLEEAM QYIGFLHRQV KLLSAPYLES SAATKDPGLE  120
PCSLRSRGLC LVPVSLTIGV AESNGADIWA PIKTTTSPPK FEKEAAQFQS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016180996.11e-124PREDICTED: transcription factor bHLH113 isoform X1
SwissprotQ9LT671e-34BH113_ARATH; Transcription factor bHLH113
TrEMBLC6T5091e-102C6T509_SOYBN; BHLH transcription factor
STRINGGLYMA02G15520.11e-101(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108133138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.51e-53bHLH family protein